- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : F-box/RNI-like superfamily protein
Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G52650 | |
| Cluster | HCCA: Cluster_67 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G19070 | No alias | F-box family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G64540 | No alias | F-box/FBD-like domains containing protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G29930 | No alias | F-box/RNI-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G42720 | No alias | FBD, F-box, Skp2-like and Leucine Rich Repeat domains... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G54160 | No alias | RNI-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G58860 | No alias | F-box/RNI-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G58980 | No alias | F-box family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G59000 | No alias | F-box/RNI-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G59230 | No alias | RNI-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G59240 | No alias | RNI-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G00320 | No alias | F-box/RNI-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G22280 | No alias | F-box/RNI-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G15620 | No alias | F-box/RNI-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G35926 | No alias | Protein with RNI-like/FBD-like domains | 0.05 | OrthoFinder output from all 47 species | |
| AT5G38392 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AT5G38396 | No alias | F-box/RNI-like superfamily protein | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001872 | (1->3)-beta-D-glucan binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0008565 | obsolete protein transporter activity | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| CC | GO:0046658 | obsolete anchored component of plasma membrane | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001810 | F-box_dom | 46 | 80 |
| No external refs found! |