Description : Tudor/PWWP/MBT superfamily protein
Gene families : OG0002361 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002361_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT1G51745 | |
Cluster | HCCA: Cluster_13 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aspi01Gene19700.t1 | Aspi01Gene19700 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G093600.1 | Ceric.02G093600 | histone H3 methylation reader (PWO) of PRC2 histone... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g04945 | No alias | histone H3 methylation reader (PWO) of PRC2 histone... | 0.02 | OrthoFinder output from all 47 species | |
Dde_g11604 | No alias | histone H3 methylation reader (PWO) of PRC2 histone... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g37790.1 | LOC_Os01g37790 | histone H3 methylation reader (PWO) | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g20077 | No alias | histone H3 methylation reader (PWO) of PRC2 histone... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g12655 | No alias | histone H3 methylation reader (PWO) of PRC2 histone... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000419 | RNA polymerase V complex | IEP | HCCA |
CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | HCCA |
BP | GO:0000719 | photoreactive repair | IEP | HCCA |
MF | GO:0003864 | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | IEP | HCCA |
MF | GO:0004610 | phosphoacetylglucosamine mutase activity | IEP | HCCA |
MF | GO:0004614 | phosphoglucomutase activity | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005739 | mitochondrion | IEP | HCCA |
BP | GO:0006040 | amino sugar metabolic process | IEP | HCCA |
BP | GO:0006047 | UDP-N-acetylglucosamine metabolic process | IEP | HCCA |
BP | GO:0006048 | UDP-N-acetylglucosamine biosynthetic process | IEP | HCCA |
BP | GO:0006290 | pyrimidine dimer repair | IEP | HCCA |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
BP | GO:0006813 | potassium ion transport | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | HCCA |
BP | GO:0009226 | nucleotide-sugar biosynthetic process | IEP | HCCA |
BP | GO:0015939 | pantothenate metabolic process | IEP | HCCA |
BP | GO:0015940 | pantothenate biosynthetic process | IEP | HCCA |
CC | GO:0016602 | CCAAT-binding factor complex | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | HCCA |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
BP | GO:0019255 | glucose 1-phosphate metabolic process | IEP | HCCA |
CC | GO:0030880 | RNA polymerase complex | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0046349 | amino sugar biosynthetic process | IEP | HCCA |
CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | HCCA |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000313 | PWWP_dom | 15 | 112 |
No external refs found! |