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  5. AT1G50350

AT1G50350


Description : BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19950.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G50350

Target Alias Description ECC score Gene Family Method Actions
AT1G21960 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G29840 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G53910 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Gb_12946 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006863 purine nucleobase transport IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 19 51
No external refs found!