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  5. AT1G49930

AT1G49930


Description : BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc (TAIR:AT5G22800.1); Has 21 Blast hits to 21 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001528_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49930

Target Alias Description ECC score Gene Family Method Actions
Ala_g34088 ACD, ALATS EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01023918001 EMB86, EMB1030, EMB263 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
MA_10282308g0010 EMB86, EMB1030, EMB263 alanine-tRNA ligase 0.01 OrthoFinder output from all 47 species
Sam_g26484 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!