1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G49850

AT1G49850


Description : RING/U-box superfamily protein


Gene families : OG0000957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000957_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49850
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271240 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Aob_g16558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g08250.1 LOC_Os06g08250 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_10426524g0010 No alias Probable E3 ubiquitin-protein ligase RHY1A... 0.02 OrthoFinder output from all 47 species
Sam_g17377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
MF GO:0008265 Mo-molybdopterin cofactor sulfurase activity IEP HCCA
BP GO:0009687 abscisic acid metabolic process IEP HCCA
BP GO:0009688 abscisic acid biosynthetic process IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
MF GO:0010436 carotenoid dioxygenase activity IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016783 sulfurtransferase activity IEP HCCA
BP GO:0043288 apocarotenoid metabolic process IEP HCCA
BP GO:0043289 apocarotenoid biosynthetic process IEP HCCA
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:1902644 tertiary alcohol metabolic process IEP HCCA
BP GO:1902645 tertiary alcohol biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 202 244
No external refs found!