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  5. AT1G49400

AT1G49400 (emb1129)


Aliases : emb1129

Description : Nucleic acid-binding, OB-fold-like protein


Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49400

Target Alias Description ECC score Gene Family Method Actions
Als_g05225 emb1129 component *(uS17m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001307.5 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre02.g118950 emb1129 Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
MA_598246g0010 emb1129 component mtRPS17 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Sam_g27826 No alias component *(uS17m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Smo59743 emb1129 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Interproscan
BP GO:0006354 DNA-templated transcription elongation RCA Interproscan
BP GO:0006412 translation ISS Interproscan
BP GO:0009793 embryo development ending in seed dormancy NAS Interproscan
CC GO:0022627 cytosolic small ribosomal subunit ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005459 UDP-galactose transmembrane transporter activity IEP HCCA
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015786 UDP-glucose transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0048468 cell development IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:0080147 root hair cell development IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 6 73
No external refs found!