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  5. AT1G49260

AT1G49260


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 5 (TAIR:AT3G14810.1); Has 140 Blast hits to 140 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49260

Target Alias Description ECC score Gene Family Method Actions
AT2G17000 No alias Mechanosensitive ion channel family protein 0.01 OrthoFinder output from all 47 species
Cba_g17637 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008726001 No alias Solute transport.channels.MSL mechanosensitive ion channel 0.04 OrthoFinder output from all 47 species
MA_6758362g0010 MSL5 mechanosensitive ion channel (MSL) 0.02 OrthoFinder output from all 47 species
Ppi_g11091 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0006863 purine nucleobase transport RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!