AT1G49140

Description : Complex I subunit NDUFS6

Gene families : OG0007856 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007856_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G49140
Cluster	HCCA: Cluster_116

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00079p00095540	evm_27.TU.AmTr_v1...	Cellular respiration.oxidative phosphorylation.NADH...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021133.9	No alias	Cellular respiration.oxidative phosphorylation.NADH...	0.03	OrthoFinder output from all 47 species
GSVIVT01008282001	No alias	Cellular respiration.oxidative phosphorylation.NADH...	0.06	OrthoFinder output from all 47 species
LOC_Os10g42540.1	LOC_Os10g42540	component NDUFB10 of NADH dehydrogenase beta subcomplex	0.06	OrthoFinder output from all 47 species
MA_852g0010	No alias	component NDUFB10 of NADH dehydrogenase beta subcomplex	0.05	OrthoFinder output from all 47 species
Mp3g16160.1	No alias	component NDUFB10 of NADH dehydrogenase beta subcomplex	0.08	OrthoFinder output from all 47 species
Pp3c9_26150V3.1	Pp3c9_26150	Complex I subunit NDUFS6	0.02	OrthoFinder output from all 47 species
Solyc12g036790.2.1	Solyc12g036790	component NDUFB10 of NADH dehydrogenase beta subcomplex	0.06	OrthoFinder output from all 47 species
Zm00001e012993_P001	Zm00001e012993	component NDUFB10 of NADH dehydrogenase beta subcomplex	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005747	mitochondrial respiratory chain complex I	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009853	photorespiration	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0030964	NADH dehydrogenase complex	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031966	mitochondrial membrane	IDA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0045271	respiratory chain complex I	IDA	Interproscan
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
CC	GO:0098803	respiratory chain complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
MF	GO:0008121	ubiquinol-cytochrome-c reductase activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
BP	GO:0015995	chlorophyll biosynthetic process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0035966	response to topologically incorrect protein	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
MF	GO:0050897	cobalt ion binding	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051788	response to misfolded protein	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0080129	proteasome core complex assembly	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019377	NADH_UbQ_OxRdtase_su10	25	82

External Links

No external refs found!

AT1G49140

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation