AT1G49130


Description : B-box type zinc finger protein with CCT domain


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49130
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Adi_g100906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04399 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30657 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15231.t1 Aspi01Gene15231 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16706.t1 Aspi01Gene16706 CMF transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.08G070500.1 Ceric.08G070500 BBX class-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
MA_10428386g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_470965g0010 No alias transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Msp_g47217 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14853 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012194_P001 Zm00001e012194 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0002238 response to molecule of fungal origin IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0009641 shade avoidance IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016630 protochlorophyllide reductase activity IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0048513 animal organ development IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 24 67
IPR010402 CCT_domain 278 320
No external refs found!