AT1G48870

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG0001278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001278_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G48870
Cluster	HCCA: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
Aev_g28795	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene33509.t2	Aspi01Gene33509	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os11g08400.1	LOC_Os11g08400	COMPASS-like H3K4 histone methylase component WDR5B...	0.02	OrthoFinder output from all 47 species
Len_g22473	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g18665	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e041292_P002	Zm00001e041292	COMPASS-like H3K4 histone methylase component WDR5B...	0.03	OrthoFinder output from all 47 species
Zm00001e041942_P002	Zm00001e041942	COMPASS-like H3K4 histone methylase component WDR5B...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0004871	obsolete signal transducer activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005834	heterotrimeric G-protein complex	ISS	Interproscan
BP	GO:0007165	signal transduction	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1905360	GTPase complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	264	298
IPR001680	WD40_repeat	192	225
IPR001680	WD40_repeat	304	340

External Links

No external refs found!