Description : auxin-responsive GH3 family protein
Gene families : OG0000376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000376_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT1G48670 | |
Cluster | HCCA: Cluster_84 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00016p00234260 | GH3.17,... | Indole-3-acetic acid-amido synthetase GH3.17... | 0.04 | OrthoFinder output from all 47 species | |
AT5G54510 | DFL1, GH3.6 | Auxin-responsive GH3 family protein | 0.04 | OrthoFinder output from all 47 species | |
Ala_g24399 | GH3.5, WES1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g32269 | GH3.5, WES1 | indole-3-acetic acid-amido synthetase *(GH3) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene06631.t1 | GH3.5, WES1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g05671 | GH3.5, WES1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01014545001 | DFL1, GH3.6 | Indole-3-acetic acid-amido synthetase GH3.6... | 0.03 | OrthoFinder output from all 47 species | |
Gb_04369 | No alias | indole-3-acetic acid-amido synthetase | 0.02 | OrthoFinder output from all 47 species | |
Gb_12334 | GH3.5, WES1 | Indole-3-acetic acid-amido synthetase GH3.5... | 0.03 | OrthoFinder output from all 47 species | |
Gb_33150 | No alias | Indole-3-acetic acid-amido synthetase GH3.5... | 0.04 | OrthoFinder output from all 47 species | |
MA_100975g0010 | DFL1, GH3.6 | Indole-3-acetic acid-amido synthetase GH3.6... | 0.03 | OrthoFinder output from all 47 species | |
MA_10178158g0010 | DFL1, GH3.6 | Indole-3-acetic acid-amido synthetase GH3.6... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g28987 | DFL1, GH3.6 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g37634 | DFL1, GH3.6 | indole-3-acetic acid-amido synthetase *(GH3) & original... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g43816 | DFL1, GH3.6 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g12387 | GH3.5, WES1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g58146 | GH3.1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g14022 | DFL1, GH3.6 | indole-3-acetic acid-amido synthetase *(GH3) & original... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g24454 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g33608 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
CC | GO:0005737 | cytoplasm | ISM | Interproscan |
BP | GO:0009733 | response to auxin | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | HCCA |
MF | GO:0004034 | aldose 1-epimerase activity | IEP | HCCA |
MF | GO:0005507 | copper ion binding | IEP | HCCA |
CC | GO:0005576 | extracellular region | IEP | HCCA |
BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
BP | GO:0006012 | galactose metabolic process | IEP | HCCA |
BP | GO:0006826 | iron ion transport | IEP | HCCA |
BP | GO:0009267 | cellular response to starvation | IEP | HCCA |
BP | GO:0009991 | response to extracellular stimulus | IEP | HCCA |
BP | GO:0010106 | cellular response to iron ion starvation | IEP | HCCA |
BP | GO:0010167 | response to nitrate | IEP | HCCA |
BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
BP | GO:0015706 | nitrate transmembrane transport | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | HCCA |
BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
BP | GO:0031667 | response to nutrient levels | IEP | HCCA |
BP | GO:0031668 | cellular response to extracellular stimulus | IEP | HCCA |
BP | GO:0031669 | cellular response to nutrient levels | IEP | HCCA |
BP | GO:0042594 | response to starvation | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
BP | GO:0071496 | cellular response to external stimulus | IEP | HCCA |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
BP | GO:0098661 | inorganic anion transmembrane transport | IEP | HCCA |
BP | GO:1902025 | nitrate import | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004993 | GH3 | 151 | 501 |
No external refs found! |