AT1G48370 (YSL8)

Aliases : YSL8

Description : YELLOW STRIPE like 8

Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G48370

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00090040	YSL7,...	Solute transport.carrier-mediated transport.OPT...	0.02	OrthoFinder output from all 47 species
AMTR_s00029p00090440	evm_27.TU.AmTr_v1...	Solute transport.carrier-mediated transport.OPT...	0.02	OrthoFinder output from all 47 species
Dac_g40018	YSL6	ferric cation-chelator transporter *(YSL) & original...	0.03	OrthoFinder output from all 47 species
LOC_Os01g13710.1	YSL7, LOC_Os01g13710	iron chelator transporter (YSL). ferric cation-chelator...	0.02	OrthoFinder output from all 47 species
LOC_Os02g02450.1	YSL8, LOC_Os02g02450	iron chelator transporter (YSL). ferric cation-chelator...	0.02	OrthoFinder output from all 47 species
LOC_Os04g44300.1	YSL7, LOC_Os04g44300	iron chelator transporter (YSL). ferric cation-chelator...	0.02	OrthoFinder output from all 47 species
MA_8914283g0010	ATYSL3, YSL3	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Sam_g50897	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006857	oligopeptide transport	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015833	peptide transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0009612	response to mechanical stimulus	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009914	hormone transport	IEP	HCCA
BP	GO:0009926	auxin polar transport	IEP	HCCA
BP	GO:0010817	regulation of hormone levels	IEP	HCCA
BP	GO:0060918	auxin transport	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004813	OPT	71	694

External Links

No external refs found!