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AT1G48280


Description : hydroxyproline-rich glycoprotein family protein


Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G48280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00127710 evm_27.TU.AmTr_v1... Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00155p00024540 CHUP1,... Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G07120 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species
GSVIVT01017698001 No alias Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01021189001 No alias Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01024701001 No alias Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os05g49820.1 LOC_Os05g49820 regulatory protein (IPGA) of cortical microtubule organisation 0.07 OrthoFinder output from all 47 species
MA_211108g0010 CHUP1 regulatory protein (IPGA) of cortical microtubule organisation 0.03 OrthoFinder output from all 47 species
Nbi_g32646 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g069560.3.1 CHUP1, Solyc02g069560 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e020303_P001 Zm00001e020303 regulatory protein (IPGA) of cortical microtubule organisation 0.05 OrthoFinder output from all 47 species
Zm00001e029282_P001 CHUP1, Zm00001e029282 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009786 regulation of asymmetric cell division IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
CC GO:0009986 cell surface IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0030139 endocytic vesicle IEP HCCA
CC GO:0031209 SCAR complex IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051125 regulation of actin nucleation IEP HCCA
BP GO:0051127 positive regulation of actin nucleation IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051495 positive regulation of cytoskeleton organization IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902905 positive regulation of supramolecular fiber organization IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA

No InterPro domains available for this sequence

No external refs found!