AT1G48195

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein

Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G48195

Target	Alias	Description	ECC score	Gene Family Method
AT1G29570	No alias	Zinc finger C-x8-C-x5-C-x3-H type family protein	0.04	OrthoFinder output from all 47 species
Adi_g017416	ZFN1	regulatory protein of RNA homeostasis & original...	0.02	OrthoFinder output from all 47 species
Aev_g04666	No alias	regulatory protein of RNA homeostasis & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0049.g030794	ZFN1	regulatory protein of RNA homeostasis & original...	0.03	OrthoFinder output from all 47 species
Cba_g20823	ZFN1	regulatory protein of RNA homeostasis & original...	0.02	OrthoFinder output from all 47 species
Cba_g32845	No alias	regulatory protein of RNA homeostasis & original...	0.02	OrthoFinder output from all 47 species
Dde_g04320	No alias	regulatory protein of RNA homeostasis & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001558	regulation of cell growth	IEP	HCCA
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	HCCA
BP	GO:0022604	regulation of cell morphogenesis	IEP	HCCA
BP	GO:0042023	DNA endoreduplication	IEP	HCCA
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0044786	cell cycle DNA replication	IEP	HCCA
MF	GO:0045309	protein phosphorylated amino acid binding	IEP	HCCA
MF	GO:0051219	phosphoprotein binding	IEP	HCCA
BP	GO:0051510	regulation of unidimensional cell growth	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	57	80

External Links

No external refs found!