AT1G47980


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0000960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000960_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G47980

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00253560 evm_27.TU.AmTr_v1... Desiccation-related protein PCC13-62 OS=Craterostigma... 0.13 OrthoFinder output from all 47 species
AMTR_s00016p00253590 evm_27.TU.AmTr_v1... Desiccation-related protein PCC13-62 OS=Craterostigma... 0.13 OrthoFinder output from all 47 species
AT3G62730 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Adi_g086792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g124909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g26650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g35109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03760 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31936 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g69430 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene09415.t1 Aspi01Gene09415 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38681.t1 Aspi01Gene38681 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000855 No alias not classified & original description: CDS=1-1059 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008071 No alias not classified & original description: CDS=1-903 0.04 OrthoFinder output from all 47 species
Azfi_s0038.g026236 No alias not classified & original description: CDS=1-975 0.06 OrthoFinder output from all 47 species
Ceric.19G026400.1 Ceric.19G026400 not classified & original description: pacid=50575499... 0.04 OrthoFinder output from all 47 species
Ceric.19G026500.1 Ceric.19G026500 not classified & original description: pacid=50575626... 0.05 OrthoFinder output from all 47 species
Ceric.19G027300.1 Ceric.19G027300 not classified & original description: pacid=50576564... 0.09 OrthoFinder output from all 47 species
Dde_g46974 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
GSVIVT01027969001 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.05 OrthoFinder output from all 47 species
GSVIVT01035573001 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.06 OrthoFinder output from all 47 species
Gb_11266 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
Gb_15806 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
Gb_19468 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Gb_19469 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Gb_32514 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
LOC_Os03g22470.1 LOC_Os03g22470 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
LOC_Os05g05920.1 LOC_Os05g05920 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.14 OrthoFinder output from all 47 species
Len_g44499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g46480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57690 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10431585g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
MA_10432841g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
MA_19739g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.01 OrthoFinder output from all 47 species
MA_276729g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
Msp_g12800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09420 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g15282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo15031 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
Solyc01g099530.3.1 Solyc01g099530 Pentatricopeptide repeat-containing protein At5g14770,... 0.16 OrthoFinder output from all 47 species
Solyc01g099570.4.1 Solyc01g099570 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc01g099580.3.1 Solyc01g099580 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Solyc05g053350.3.1 Solyc05g053350 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.05 OrthoFinder output from all 47 species
Solyc09g014310.3.1 Solyc09g014310 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Spa_g46655 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g46656 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g44830 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e001638_P001 Zm00001e001638 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.05 OrthoFinder output from all 47 species
Zm00001e029735_P001 Zm00001e029735 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.07 OrthoFinder output from all 47 species
Zm00001e040816_P001 Zm00001e040816 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!