1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G46840

AT1G46840


Description : F-box family protein


Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G46840
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT1G30920 No alias F-box family protein 0.07 OrthoFinder output from all 47 species
AT1G30925 No alias phospholipase Cs 0.16 OrthoFinder output from all 47 species
AT1G30930 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT1G31090 No alias F-box family protein 0.12 OrthoFinder output from all 47 species
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.16 OrthoFinder output from all 47 species
AT1G43005 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.07 OrthoFinder output from all 47 species
AT1G46912 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT1G47350 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT1G47730 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species
AT1G47800 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT1G47810 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.13 OrthoFinder output from all 47 species
AT1G53815 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT1G59690 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.14 OrthoFinder output from all 47 species
AT1G61060 No alias F-box family protein 0.11 OrthoFinder output from all 47 species
AT2G02890 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G10240 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G23960 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G47140 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from all 47 species
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT3G52330 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT4G09190 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT4G13060 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G22791 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT5G38810 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.16 OrthoFinder output from all 47 species
AT5G50220 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT5G62660 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0016020 membrane ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 231 343
IPR001810 F-box_dom 31 70
No external refs found!