Description : Ribosomal protein L6 family
Gene families : OG0001493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001493_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00018p00131950 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.17 | OrthoFinder output from all 47 species | |
AMTR_s00048p00062300 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.13 | OrthoFinder output from all 47 species | |
Adi_g042779 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g042780 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Adi_g046740 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g082405 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Aev_g08360 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g08837 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.15 | OrthoFinder output from all 47 species | |
Als_g37907 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Als_g56569 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Als_g62254 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Aop_g00197 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.23 | OrthoFinder output from all 47 species | |
Azfi_s0007.g011131 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.18 | OrthoFinder output from all 47 species | |
Cba_g10828 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g24600 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g47735 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g71228 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.01G085000.1 | Ceric.01G085000 | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.13G058300.1 | Ceric.13G058300 | component *(uL6) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.1Z004300.1 | Ceric.1Z004300 | component *(uL6) of large ribosomal-subunit (LSU)... | 0.23 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001532.12 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.27 | OrthoFinder output from all 47 species | |
Cre12.g494050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.18 | OrthoFinder output from all 47 species | |
Dac_g00432 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.14 | OrthoFinder output from all 47 species | |
Dcu_g11153 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g27021 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
GSVIVT01016795001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.28 | OrthoFinder output from all 47 species | |
GSVIVT01038670001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | OrthoFinder output from all 47 species | |
LOC_Os02g01332.1 | LOC_Os02g01332 | component RPL9 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os09g31180.1 | LOC_Os09g31180 | component RPL9 of LSU proteome component | 0.29 | OrthoFinder output from all 47 species | |
Len_g14020 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Len_g41927 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g20813 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g22504 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
MA_38141g0010 | No alias | component RPL9 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Mp4g24070.1 | No alias | component RPL9 of LSU proteome component | 0.27 | OrthoFinder output from all 47 species | |
Msp_g02241 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.17 | OrthoFinder output from all 47 species | |
Msp_g34146 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g06570 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g19909 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Ore_g07771 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g01800 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g07375 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g29031 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g60986 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Pp3c10_8500V3.1 | Pp3c10_8500 | Ribosomal protein L6 family | 0.09 | OrthoFinder output from all 47 species | |
Pp3c14_8600V3.1 | Pp3c14_8600 | Ribosomal protein L6 family | 0.2 | OrthoFinder output from all 47 species | |
Pp3c16_20070V3.1 | Pp3c16_20070 | Ribosomal protein L6 family | 0.09 | OrthoFinder output from all 47 species | |
Ppi_g20158 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g28530 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g34050 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g56682 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0008.g004263 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0064.g015839 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g05554 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
Sam_g11980 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.19 | OrthoFinder output from all 47 species | |
Sam_g12948 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.17 | OrthoFinder output from all 47 species | |
Sam_g32375 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.14 | OrthoFinder output from all 47 species | |
Sam_g42265 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g45551 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Smo269009 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.13 | OrthoFinder output from all 47 species | |
Solyc06g073310.3.1 | Solyc06g073310 | component RPL9 of LSU proteome component | 0.34 | OrthoFinder output from all 47 species | |
Solyc08g014550.3.1 | Solyc08g014550 | component RPL9 of LSU proteome component | 0.27 | OrthoFinder output from all 47 species | |
Solyc12g096700.2.1 | Solyc12g096700 | component RPL9 of LSU proteome component | 0.3 | OrthoFinder output from all 47 species | |
Spa_g22811 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.27 | OrthoFinder output from all 47 species | |
Spa_g24089 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.17 | OrthoFinder output from all 47 species | |
Spa_g28673 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Spa_g43562 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.14 | OrthoFinder output from all 47 species | |
Tin_g00341 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.14 | OrthoFinder output from all 47 species | |
Zm00001e025404_P001 | Zm00001e025404 | component RPL9 of LSU proteome component | 0.14 | OrthoFinder output from all 47 species | |
Zm00001e029810_P003 | Zm00001e029810 | component RPL9 of LSU proteome component | 0.29 | OrthoFinder output from all 47 species | |
Zm00001e036699_P002 | Zm00001e036699 | component RPL9 of LSU proteome component | 0.31 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | ISS | Interproscan |
CC | GO:0005730 | nucleolus | IDA | Interproscan |
CC | GO:0005737 | cytoplasm | ISM | Interproscan |
CC | GO:0005773 | vacuole | IDA | Interproscan |
CC | GO:0005774 | vacuolar membrane | IDA | Interproscan |
CC | GO:0005829 | cytosol | IDA | Interproscan |
CC | GO:0005886 | plasma membrane | IDA | Interproscan |
BP | GO:0006412 | translation | ISS | Interproscan |
CC | GO:0009506 | plasmodesma | IDA | Interproscan |
CC | GO:0009507 | chloroplast | IDA | Interproscan |
CC | GO:0015934 | large ribosomal subunit | ISS | Interproscan |
CC | GO:0016020 | membrane | IDA | Interproscan |
CC | GO:0022626 | cytosolic ribosome | IDA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |