AT1G32410

Description : Vacuolar protein sorting 55 (VPS55) family protein

Gene families : OG0002136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002136_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G32410

Target	Alias	Description	ECC score	Gene Family Method
Lfl_g32762	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g38871	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c6_13440V3.1	Pp3c6_13440	Vacuolar protein sorting 55 (VPS55) family protein	0.02	OrthoFinder output from all 47 species
Solyc08g077260.3.1	Solyc08g077260	Vacuolar protein sorting-associated protein 55 homolog...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	IDA	Interproscan
BP	GO:0006810	transport	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
BP	GO:0009860	pollen tube growth	IEP	HCCA
BP	GO:0010162	seed dormancy process	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
BP	GO:0022611	dormancy process	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007262	Vps55/LEPROT	17	131

External Links

No external refs found!