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AT1G32090


Description : early-responsive to dehydration stress protein (ERD4)


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G32090

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00143150 evm_27.TU.AmTr_v1... Solute transport.channels.OSCA calcium-permeable channel 0.06 OrthoFinder output from all 47 species
AT1G62320 No alias ERD (early-responsive to dehydration stress) family protein 0.04 OrthoFinder output from all 47 species
AT3G01100 HYP1, ATHYP1 hypothetical protein 1 0.04 OrthoFinder output from all 47 species
Adi_g015467 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04408 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0199.g057474 ERD4 not classified & original description: CDS=1-558 0.05 OrthoFinder output from all 47 species
Cba_g58034 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G053600.1 ERD4, Ceric.21G053600 calcium-permeable channel *(OSCA) & original... 0.05 OrthoFinder output from all 47 species
Ceric.28G040200.1 Ceric.28G040200 calcium-permeable channel *(OSCA) & original... 0.06 OrthoFinder output from all 47 species
Dde_g12509 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_24188 No alias calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Len_g05384 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24317 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31407 ERD4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09913 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20112 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000924 ERD4 calcium-permeable channel *(OSCA) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g036260.4.1 Solyc02g036260 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Solyc07g048110.4.1 Solyc07g048110 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Zm00001e016316_P001 Zm00001e016316 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
InterPro domains Description Start Stop
IPR003864 CSC1/OSCA1-like_7TM 373 645
IPR032880 Csc1/OSCA1-like_N 7 179
IPR027815 CSC1/OSCA1-like_cyt 200 362
No external refs found!