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AT1G31940


Description : unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0002266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002266_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G31940

Target Alias Description ECC score Gene Family Method Actions
Ala_g21314 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G075000.1 Ceric.02G075000 not classified & original description: pacid=50585066... 0.02 OrthoFinder output from all 47 species
Dde_g13526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015526_P001 Zm00001e015526 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000815 ESCRT III complex IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!