1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G31163

AT1G31163


Description : F-box associated ubiquitination effector family protein


Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G31163
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT1G26510 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT1G30920 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT1G30925 No alias phospholipase Cs 0.12 OrthoFinder output from all 47 species
AT1G30930 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT1G31090 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT1G43005 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.08 OrthoFinder output from all 47 species
AT1G46912 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT1G47350 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT1G47730 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT1G47800 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT1G47810 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.14 OrthoFinder output from all 47 species
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.16 OrthoFinder output from all 47 species
AT1G53790 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G53815 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.13 OrthoFinder output from all 47 species
AT1G61060 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT2G02890 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT2G13630 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT2G19630 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.13 OrthoFinder output from all 47 species
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.15 OrthoFinder output from all 47 species
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G10240 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G23960 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT5G15670 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G22791 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT5G38810 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.13 OrthoFinder output from all 47 species
AT5G44220 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT5G50220 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G62660 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 51 114
No external refs found!