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Description : Integral membrane HRF1 family protein
Gene families : OG0003304 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003304_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G30890 | |
| Cluster | HCCA: Cluster_103 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os04g08320.1 | LOC_Os04g08320 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13266 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g083630.4.1 | Solyc06g083630 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| BP | GO:0016192 | vesicle-mediated transport | RCA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005635 | nuclear envelope | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| CC | GO:0005794 | Golgi apparatus | IEP | HCCA |
| CC | GO:0005802 | trans-Golgi network | IEP | HCCA |
| CC | GO:0005834 | heterotrimeric G-protein complex | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006098 | pentose-phosphate shunt | IEP | HCCA |
| BP | GO:0006739 | NADP metabolic process | IEP | HCCA |
| BP | GO:0006740 | NADPH regeneration | IEP | HCCA |
| BP | GO:0006900 | vesicle budding from membrane | IEP | HCCA |
| BP | GO:0009606 | tropism | IEP | HCCA |
| BP | GO:0009629 | response to gravity | IEP | HCCA |
| BP | GO:0009630 | gravitropism | IEP | HCCA |
| CC | GO:0009705 | plant-type vacuole membrane | IEP | HCCA |
| BP | GO:0009744 | response to sucrose | IEP | HCCA |
| BP | GO:0009746 | response to hexose | IEP | HCCA |
| BP | GO:0009749 | response to glucose | IEP | HCCA |
| BP | GO:0009750 | response to fructose | IEP | HCCA |
| BP | GO:0016050 | vesicle organization | IEP | HCCA |
| BP | GO:0016197 | endosomal transport | IEP | HCCA |
| BP | GO:0016482 | cytosolic transport | IEP | HCCA |
| BP | GO:0019321 | pentose metabolic process | IEP | HCCA |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| BP | GO:0034284 | response to monosaccharide | IEP | HCCA |
| BP | GO:0034285 | response to disaccharide | IEP | HCCA |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | HCCA |
| BP | GO:0042732 | D-xylose metabolic process | IEP | HCCA |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | HCCA |
| BP | GO:0048468 | cell development | IEP | HCCA |
| BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0061024 | membrane organization | IEP | HCCA |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0080147 | root hair cell development | IEP | HCCA |
| CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1905360 | GTPase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005578 | Yif1_fam | 41 | 260 |
| No external refs found! |