AT1G30230

Description : Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6

Gene families : OG0001031 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001031_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G30230

Target	Alias	Description	ECC score	Gene Family Method
Adi_g039465	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Adi_g103824	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Aob_g19175	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.04	OrthoFinder output from all 47 species
Aspi01Gene30711.t1	Aspi01Gene30711	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species
Ceric.32G024000.1	Ceric.32G024000	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000093.158	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001126.9	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.02	OrthoFinder output from all 47 species
Gb_07694	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.02	OrthoFinder output from all 47 species
LOC_Os07g46750.1	LOC_Os07g46750	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.04	OrthoFinder output from all 47 species
Lfl_g24793	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species
Mp8g01660.1	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.06	OrthoFinder output from all 47 species
Sam_g12733	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species
Sam_g17349	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Sam_g31515	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Sam_g49094	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.03	OrthoFinder output from all 47 species
Sam_g49095	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species
Solyc01g098000.3.1	Solyc01g098000	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.03	OrthoFinder output from all 47 species
Tin_g14955	No alias	component *(eEF1B-beta/-delta) of eEF1B...	0.02	OrthoFinder output from all 47 species
Zm00001e035548_P001	Zm00001e035548	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005853	eukaryotic translation elongation factor 1 complex	ISS	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
BP	GO:0006414	translational elongation	ISS	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009698	phenylpropanoid metabolic process	None	Extended
BP	GO:0009808	lignin metabolic process	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	None	Extended
BP	GO:0010962	regulation of glucan biosynthetic process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032881	regulation of polysaccharide metabolic process	None	Extended
BP	GO:0032885	regulation of polysaccharide biosynthetic process	None	Extended
BP	GO:0032950	regulation of beta-glucan metabolic process	None	Extended
BP	GO:0032951	regulation of beta-glucan biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043255	regulation of carbohydrate biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070726	cell wall assembly	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071668	plant-type cell wall assembly	IMP	Interproscan
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001006	regulation of cellulose biosynthetic process	IMP	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	HCCA
MF	GO:0004798	thymidylate kinase activity	IEP	HCCA
MF	GO:0004871	obsolete signal transducer activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005654	nucleoplasm	IEP	HCCA
BP	GO:0006470	protein dephosphorylation	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009958	positive gravitropism	IEP	HCCA
BP	GO:0010043	response to zinc ion	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	HCCA
CC	GO:0022625	cytosolic large ribosomal subunit	IEP	HCCA
CC	GO:0022626	cytosolic ribosome	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
CC	GO:0071944	cell periphery	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014038	EF1B_bsu/dsu_GNE	144	231

External Links

No external refs found!

AT1G30230

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation