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AT1G30090


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0004179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G30090

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00203560 AFR,... F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g074265 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.02 OrthoFinder output from all 47 species
Cba_g22402 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.02 OrthoFinder output from all 47 species
Dac_g01659 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.03 OrthoFinder output from all 47 species
Msp_g08178 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.02 OrthoFinder output from all 47 species
Smo55890 No alias F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005458 GDP-mannose transmembrane transporter activity IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015368 calcium:monoatomic cation antiporter activity IEP HCCA
MF GO:0015491 obsolete cation:cation antiporter activity IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
MF GO:0036080 purine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 54 85
IPR006652 Kelch_1 196 241
No external refs found!