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AT1G29550


Description : Eukaryotic initiation factor 4E protein


Gene families : OG0001969 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001969_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G29550
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Adi_g011318 EIF4E, CUM1,... component *(eIF-iso4E) of eIF-iso4F unwinding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g11924 EIF4E, CUM1,... component *(eIF-iso4E) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
MA_10435407g0010 EIF4E, CUM1,... component eIF4E of eIF4F mRNA unwinding complex.... 0.03 OrthoFinder output from all 47 species
Zm00001e018268_P001 EIF4E, CUM1,... component eIF4E of eIF4F mRNA unwinding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
MF GO:0003743 translation initiation factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm ISS Interproscan
BP GO:0006413 translational initiation ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0004300 enoyl-CoA hydratase activity IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009649 entrainment of circadian clock IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
MF GO:0009824 AMP dimethylallyltransferase activity IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0043153 entrainment of circadian clock by photoperiod IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
MF GO:0052381 tRNA dimethylallyltransferase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001040 TIF_eIF_4E 67 218
No external refs found!