AT1G28250

Description : unknown protein; Has 22 Blast hits to 22 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Gene families : OG0008591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008591_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G28250
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
Ala_g13040	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g00602	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e033331_P001	Zm00001e033331	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006650	glycerophospholipid metabolic process	None	Extended
BP	GO:0006661	phosphatidylinositol biosynthetic process	RCA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006865	amino acid transport	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015804	neutral amino acid transport	None	Extended
BP	GO:0015824	proline transport	RCA	Interproscan
BP	GO:0015849	organic acid transport	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0045017	glycerolipid biosynthetic process	None	Extended
BP	GO:0046474	glycerophospholipid biosynthetic process	None	Extended
BP	GO:0046486	glycerolipid metabolic process	None	Extended
BP	GO:0046488	phosphatidylinositol metabolic process	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	HCCA
CC	GO:0000785	chromatin	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	HCCA
BP	GO:0006007	glucose catabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006366	transcription by RNA polymerase II	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
BP	GO:0016032	viral process	IEP	HCCA
BP	GO:0019320	hexose catabolic process	IEP	HCCA
MF	GO:0030527	structural constituent of chromatin	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0046365	monosaccharide catabolic process	IEP	HCCA
BP	GO:0046786	viral replication complex formation and maintenance	IEP	HCCA
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G28250

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation