AT1G26910 (RPL10B)

Aliases : RPL10B

Description : Ribosomal protein L16p/L10e family protein

Gene families : OG0001847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001847_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G26910

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00151750	RPL10B,...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AT1G14320	SAC52, RPL10, RPL10A	Ribosomal protein L16p/L10e family protein	0.04	OrthoFinder output from all 47 species
Adi_g019250	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aob_g06279	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g13129	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g21340	RPL10C, SAG24	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene01249.t1	RPL10B, Aspi01Gene01249	component *(uL16) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cba_g01654	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001424.5	RPL10C, SAG24	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Dcu_g04412	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01001137001	RPL10B	60S ribosomal protein L10 OS=Vitis riparia	0.1	OrthoFinder output from all 47 species
Gb_06067	RPL10B	component RPL10 of LSU proteome component	0.04	OrthoFinder output from all 47 species
MA_17326g0010	SAC52, RPL10, RPL10A	component RPL10 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Mp4g23990.1	RPL10B	component RPL10 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Msp_g21522	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pp3c11_4130V3.1	RPL10B, Pp3c11_4130	Ribosomal protein L16p/L10e family protein	0.03	OrthoFinder output from all 47 species
Pp3c2_29600V3.1	RPL10B, Pp3c2_29600	Ribosomal protein L16p/L10e family protein	0.02	OrthoFinder output from all 47 species
Pp3c7_22400V3.1	RPL10B, Pp3c7_22400	Ribosomal protein L16p/L10e family protein	0.03	OrthoFinder output from all 47 species
Solyc06g007520.4.1	RPL10B, Solyc06g007520	component RPL10 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Solyc06g082650.4.1	SAC52, RPL10,...	component RPL10 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Solyc06g082670.3.1	RPL10B, Solyc06g082670	component RPL10 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Spa_g51059	RPL10C, SAG24	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Tin_g35026	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Zm00001e004933_P001	RPL10B, Zm00001e004933	component RPL10 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Zm00001e012474_P002	RPL10C, SAG24,...	component RPL10 of LSU proteome component	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	ISS	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005840	ribosome	IPI	Interproscan
CC	GO:0005840	ribosome	ISS	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006412	translation	ISS	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009451	RNA modification	None	Extended
CC	GO:0009526	plastid envelope	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010224	response to UV-B	IEP	Interproscan
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032502	developmental process	IMP	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR016180	Ribosomal_L10e/L16	13	166

External Links

No external refs found!

AT1G26910 (RPL10B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation