AT1G26110 (DCP5)

Aliases : DCP5

Description : decapping 5

Gene families : OG0001620 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001620_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G26110
Cluster	HCCA: Cluster_98

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00250820	DCP5,...	RNA processing.RNA decay.deadenylation-dependent...	0.03	OrthoFinder output from all 47 species
Adi_g055165	DCP5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g31500	DCP5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cre08.g378000	DCP5	Protein decapping 5 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Dcu_g15009	DCP5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01011971001	DCP5	RNA processing.RNA decay.deadenylation-dependent...	0.06	OrthoFinder output from all 47 species
Msp_g14093	DCP5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g04587	DCP5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc05g009980.4.1	DCP5, Solyc05g009980	Protein decapping 5 OS=Arabidopsis thaliana...	0.08	OrthoFinder output from all 47 species
Spa_g14973	DCP5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e025652_P002	DCP5, Zm00001e025652	regulatory component DCP5 of mRNA decapping complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000932	P-body	IDA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006417	regulation of translation	None	Extended
BP	GO:0006486	protein glycosylation	RCA	Interproscan
BP	GO:0006487	protein N-linked glycosylation	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010603	regulation of cytoplasmic mRNA processing body assembly	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010606	positive regulation of cytoplasmic mRNA processing body assembly	IMP	Interproscan
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0010638	positive regulation of organelle organization	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0017148	negative regulation of translation	IMP	Interproscan
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031087	deadenylation-independent decapping of nuclear-transcribed mRNA	IMP	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033962	P-body assembly	IMP	Interproscan
BP	GO:0034248	regulation of amide metabolic process	None	Extended
BP	GO:0034249	negative regulation of amide metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
CC	GO:0035770	ribonucleoprotein granule	None	Extended
BP	GO:0036211	protein modification process	None	Extended
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IDA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0044089	positive regulation of cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
BP	GO:0110154	RNA decapping	None	Extended
BP	GO:0110156	methylguanosine-cap decapping	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140694	non-membrane-bounded organelle assembly	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1902115	regulation of organelle assembly	None	Extended
BP	GO:1902117	positive regulation of organelle assembly	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006470	protein dephosphorylation	IEP	HCCA
BP	GO:0007059	chromosome segregation	IEP	HCCA
BP	GO:0007062	sister chromatid cohesion	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
BP	GO:0031048	RNA-mediated heterochromatin formation	IEP	HCCA
BP	GO:0031507	heterochromatin formation	IEP	HCCA
BP	GO:0040029	epigenetic regulation of gene expression	IEP	HCCA
BP	GO:0045132	meiotic chromosome segregation	IEP	HCCA
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0070828	heterochromatin organization	IEP	HCCA
BP	GO:0098813	nuclear chromosome segregation	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025609	Lsm14-like_N	17	89
IPR019050	FDF_dom	459	553

External Links

No external refs found!

AT1G26110 (DCP5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation