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  5. AT1G24485

AT1G24485


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: protein kinase-related (TAIR:AT3G46280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0003157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G24485
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT3G46240 No alias BEST Arabidopsis thaliana protein match is: receptor... 0.04 OrthoFinder output from all 47 species
AT3G46270 No alias receptor protein kinase-related 0.04 OrthoFinder output from all 47 species
AT3G46280 No alias protein kinase-related 0.06 OrthoFinder output from all 47 species
Gb_28720 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g18000.1 LOC_Os09g18000 Probable LRR receptor-like serine/threonine-protein... 0.04 OrthoFinder output from all 47 species
MA_10388485g0010 No alias Leucine-rich repeat receptor-like... 0.02 OrthoFinder output from all 47 species
MA_10426052g0010 No alias Probable LRR receptor-like serine/threonine-protein... 0.05 OrthoFinder output from all 47 species
MA_10429727g0020 No alias Putative leucine-rich repeat receptor-like... 0.04 OrthoFinder output from all 47 species
MA_10432605g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434123g0010 No alias Probable LRR receptor-like serine/threonine-protein... 0.04 OrthoFinder output from all 47 species
MA_10434123g0020 No alias Probable LRR receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
MA_130201g0010 No alias Receptor-like protein kinase At3g21340 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_160556g0010 No alias Leucine-rich repeat receptor-like... 0.03 OrthoFinder output from all 47 species
MA_192580g0010 No alias Probable LRR receptor-like serine/threonine-protein... 0.04 OrthoFinder output from all 47 species
MA_218022g0010 No alias Uncharacterized protein At1g24485 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_303891g0010 No alias Leucine-rich repeat receptor-like... 0.03 OrthoFinder output from all 47 species
MA_7643470g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005217 intracellular ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR024788 Malectin-like_Carb-bd_dom 31 345
No external refs found!