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AT1G24330


Description : ARM repeat superfamily protein


Gene families : OG0002832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G24330
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Als_g62287 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene72640.t1 ATPUB45, PUB45,... E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38211 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g04044 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g03968 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33283 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g30490 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g42935 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32168 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16169 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30427 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e007747_P003 ATPUB45, PUB45,... U-box domain-containing protein 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e041111_P003 ATPUB45, PUB45,... U-box domain-containing protein 7 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0009507 chloroplast IDA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003613 Ubox_domain 276 345
No external refs found!