AT1G24150 (FH4, ATFH4)

Aliases : FH4, ATFH4

Description : formin homologue 4

Gene families : OG0001137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G24150

Target	Alias	Description	ECC score	Gene Family Method
Als_g37627	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.22G057800.1	AHF1, FH1, AFH1,...	group-I formin actin filament elongation factor &...	0.04	OrthoFinder output from all 47 species
Dac_g08091	No alias	group-I formin actin filament elongation factor &...	0.02	OrthoFinder output from all 47 species
Dac_g18150	FH6, ATFH6	group-I formin actin filament elongation factor &...	0.03	OrthoFinder output from all 47 species
Ehy_g01646	No alias	group-I formin actin filament elongation factor &...	0.03	OrthoFinder output from all 47 species
Ehy_g19618	No alias	group-I formin actin filament elongation factor &...	0.02	OrthoFinder output from all 47 species
GSVIVT01007836001	ATFH8, FH8	External stimuli response.biotic stress.pathogen...	0.03	OrthoFinder output from all 47 species
LOC_Os02g50570.1	ATFH8, FH8,...	group-I formin actin filament elongation factor	0.02	OrthoFinder output from all 47 species
Len_g59609	FH6, ATFH6	group-I formin actin filament elongation factor &...	0.03	OrthoFinder output from all 47 species
Solyc05g046120.3.1	ATFH5, Fh5,...	group-I formin actin filament elongation factor	0.02	OrthoFinder output from all 47 species
Solyc07g064010.3.1	ATFH5, Fh5,...	group-I formin actin filament elongation factor	0.03	OrthoFinder output from all 47 species
Solyc10g006540.4.1	ATFH5, Fh5,...	group-I formin actin filament elongation factor	0.06	OrthoFinder output from all 47 species
Tin_g27709	FH6, ATFH6	group-I formin acTin filament elongation factor &...	0.03	OrthoFinder output from all 47 species
Zm00001e012597_P001	FH6, ATFH6,...	group-I formin actin filament elongation factor	0.02	OrthoFinder output from all 47 species
Zm00001e015771_P001	ATFH8, FH8,...	group-I formin actin filament elongation factor	0.03	OrthoFinder output from all 47 species
Zm00001e035421_P004	FH6, ATFH6,...	group-I formin actin filament elongation factor	0.03	OrthoFinder output from all 47 species
Zm00001e040521_P001	ATFH5, Fh5,...	group-I formin actin filament elongation factor	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
CC	GO:0005911	cell-cell junction	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0007015	actin filament organization	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008154	actin polymerization or depolymerization	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009627	systemic acquired resistance	RCA	Interproscan
BP	GO:0009696	salicylic acid metabolic process	None	Extended
BP	GO:0009697	salicylic acid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0018958	phenol-containing compound metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030041	actin filament polymerization	IDA	Interproscan
CC	GO:0030054	cell junction	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0042537	benzene-containing compound metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046189	phenol-containing compound biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051258	protein polymerization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
MF	GO:0004630	phospholipase D activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006955	immune response	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
BP	GO:0008219	cell death	IEP	HCCA
BP	GO:0009626	plant-type hypersensitive response	IEP	HCCA
BP	GO:0010044	response to aluminum ion	IEP	HCCA
BP	GO:0012501	programmed cell death	IEP	HCCA
CC	GO:0012505	endomembrane system	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
BP	GO:0034050	programmed cell death induced by symbiont	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0044403	biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
BP	GO:0045926	negative regulation of growth	IEP	HCCA
BP	GO:0046620	regulation of organ growth	IEP	HCCA
BP	GO:0046621	negative regulation of organ growth	IEP	HCCA
BP	GO:0048317	seed morphogenesis	IEP	HCCA
BP	GO:0048482	plant ovule morphogenesis	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048640	negative regulation of developmental growth	IEP	HCCA
BP	GO:0051093	negative regulation of developmental process	IEP	HCCA
BP	GO:0051241	negative regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051702	biological process involved in interaction with symbiont	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015425	FH2_Formin	306	500
IPR015425	FH2_Formin	500	674

External Links

No external refs found!

AT1G24150 (FH4, ATFH4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation