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AT1G23640


Description : unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function DUF220 (TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0002112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G23640
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0049.g030782 No alias not classified & original description: CDS=14-730 0.02 OrthoFinder output from all 47 species
Ore_g10568 No alias oxophytodienoate export protein *(JASSY) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g008010.3.1 Solyc01g008010 oxophytodienoate export protein (JASSY) 0.04 OrthoFinder output from all 47 species
Spa_g49514 No alias oxophytodienoate export protein *(JASSY) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0019953 sexual reproduction IEP HCCA
InterPro domains Description Start Stop
IPR003863 DUF220 305 377
IPR003863 DUF220 107 151
No external refs found!