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  5. AT1G22270

AT1G22270


Description : Trm112p-like protein


Gene families : OG0005945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G22270

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0001.g000169 No alias component *(TRM112) of TRM11-TRM112 tRNA... 0.03 OrthoFinder output from all 47 species
Cba_g00519 No alias component *(TRM112) of TRM11-TRM112 tRNA... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021612.46 No alias RNA processing.RNA modification.rRNA/tRNA... 0.01 OrthoFinder output from all 47 species
Dac_g35153 No alias component *(TRM112) of TRM11-TRM112 tRNA... 0.03 OrthoFinder output from all 47 species
LOC_Os07g43020.1 LOC_Os07g43020 component TRM112 of TRM9-TRM112 tRNA... 0.07 OrthoFinder output from all 47 species
MA_1543g0020 No alias component TRM112 of TRM9-TRM112 tRNA... 0.03 OrthoFinder output from all 47 species
Smo438712 No alias RNA processing.RNA modification.rRNA/tRNA... 0.05 OrthoFinder output from all 47 species
Solyc04g074150.3.1 Solyc04g074150 component TRM112 of TRM9-TRM112 tRNA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0035265 organ growth IMP Interproscan
BP GO:0042127 regulation of cell population proliferation IMP Interproscan
BP GO:0051726 regulation of cell cycle IMP Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0022625 cytosolic large ribosomal subunit IEP HCCA
CC GO:0022627 cytosolic small ribosomal subunit IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR005651 Trm112-like 3 113
No external refs found!