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  5. AT1G22220

AT1G22220


Description : F-box family protein


Gene families : OG0000644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G22220

Target Alias Description ECC score Gene Family Method Actions
AT1G78100 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
Adi_g060335 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g05695 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene64471.t1 Aspi01Gene64471 substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Cba_g12165 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dac_g08905 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g13923 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ehy_g09750 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
LOC_Os03g20500.1 LOC_Os03g20500 component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Lfl_g01772 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Mp3g18720.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Mp4g07250.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Ore_g01056 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g09584 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g09598 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g12031 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Spa_g51327 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e027323_P001 Zm00001e027323 component FBX of SCF E3 ubiquitin ligase complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005046 KDEL sequence binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
MF GO:0031624 ubiquitin conjugating enzyme binding IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
MF GO:0044390 ubiquitin-like protein conjugating enzyme binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0046620 regulation of organ growth IEP HCCA
BP GO:0046621 negative regulation of organ growth IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0048640 negative regulation of developmental growth IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
MF GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!