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AT1G22060


Description : LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink).


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G22060

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00223040 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g19712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55505.t1 Aspi01Gene55505 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012083 No alias not classified & original description: CDS=678-3254 0.04 OrthoFinder output from all 47 species
Azfi_s0028.g023862 No alias not classified & original description: CDS=554-2527 0.03 OrthoFinder output from all 47 species
Dcu_g15928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008970001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01008971001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01019782001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os03g01710.1 LOC_Os03g01710 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os10g21940.1 LOC_Os10g21940 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os10g36060.1 LOC_Os10g36060 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g03505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10437003g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_4780g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9751268g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp4g12160.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g04466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016347 No alias not classified & original description: CDS=389-3073 0.04 OrthoFinder output from all 47 species
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e018560_P002 Zm00001e018560 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 11 140
No external refs found!