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AT1G21530


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG0000597 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000597_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G21530
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT1G68270 No alias AMP-dependent synthetase and ligase family protein 0.03 OrthoFinder output from all 47 species
AT5G16340 No alias AMP-dependent synthetase and ligase family protein 0.08 OrthoFinder output from all 47 species
Aspi01Gene67701.t1 ACN1, AAE7,... peroxisomal acetyl-CoA synthetase *(ACN/BZU) & original... 0.03 OrthoFinder output from all 47 species
MA_9579g0010 No alias Probable acyl-activating enzyme 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ppi_g13494 AAE1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc02g082870.4.1 Solyc02g082870 Probable acyl-activating enzyme 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g043660.3.1 Solyc07g043660 Probable acyl-activating enzyme 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g075800.1.1 AAE1, Solyc08g075800 Probable acyl-activating enzyme 1, peroxisomal... 0.06 OrthoFinder output from all 47 species
Zm00001e030943_P001 AAE5, Zm00001e030943 Probable acyl-activating enzyme 5, peroxisomal... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 22 443
IPR025110 AMP-bd_C 452 533
No external refs found!