Aliases : SKP2A
Description : F-box/RNI-like superfamily protein
Gene families : OG0004331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004331_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00017p00256710 | SKP2A,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g075565 | SKP2B, ATSKP2;2 | substrate adaptor *(SKP2) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g23477 | SKP2A | substrate adaptor *(SKP2) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Als_g12768 | SKP2A | substrate adaptor *(SKP2) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene52004.t1 | SKP2B, ATSKP2;2,... | substrate adaptor *(SKP2) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019063_P001 | SKP2A, Zm00001e019063 | component F-box of SCF E3 ubiquitin ligase complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IDA | Interproscan |
MF | GO:0005515 | protein binding | IPI | Interproscan |
CC | GO:0005634 | nucleus | IDA | Interproscan |
CC | GO:0005737 | cytoplasm | ISM | Interproscan |
BP | GO:0010311 | lateral root formation | IMP | Interproscan |
BP | GO:0016567 | protein ubiquitination | IDA | Interproscan |
CC | GO:0019005 | SCF ubiquitin ligase complex | IDA | Interproscan |
CC | GO:0019005 | SCF ubiquitin ligase complex | IPI | Interproscan |
BP | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | IDA | Interproscan |
BP | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | IPI | Interproscan |
BP | GO:0045892 | negative regulation of DNA-templated transcription | RCA | Interproscan |
BP | GO:0051781 | positive regulation of cell division | IMP | Interproscan |
BP | GO:0071365 | cellular response to auxin stimulus | IDA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000373 | Group II intron splicing | IEP | HCCA |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0001101 | response to acid chemical | IEP | HCCA |
BP | GO:0001932 | regulation of protein phosphorylation | IEP | HCCA |
BP | GO:0001933 | negative regulation of protein phosphorylation | IEP | HCCA |
MF | GO:0004707 | MAP kinase activity | IEP | HCCA |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
MF | GO:0004722 | protein serine/threonine phosphatase activity | IEP | HCCA |
MF | GO:0004871 | obsolete signal transducer activity | IEP | HCCA |
BP | GO:0006301 | postreplication repair | IEP | HCCA |
BP | GO:0006469 | negative regulation of protein kinase activity | IEP | HCCA |
BP | GO:0006470 | protein dephosphorylation | IEP | HCCA |
BP | GO:0006664 | glycolipid metabolic process | IEP | HCCA |
BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | HCCA |
BP | GO:0006970 | response to osmotic stress | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | HCCA |
BP | GO:0009414 | response to water deprivation | IEP | HCCA |
BP | GO:0009415 | response to water | IEP | HCCA |
BP | GO:0009608 | response to symbiont | IEP | HCCA |
BP | GO:0009610 | response to symbiotic fungus | IEP | HCCA |
BP | GO:0009651 | response to salt stress | IEP | HCCA |
BP | GO:0009737 | response to abscisic acid | IEP | HCCA |
BP | GO:0009787 | regulation of abscisic acid-activated signaling pathway | IEP | HCCA |
BP | GO:0009788 | negative regulation of abscisic acid-activated signaling pathway | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0009968 | negative regulation of signal transduction | IEP | HCCA |
BP | GO:0010029 | regulation of seed germination | IEP | HCCA |
BP | GO:0010035 | response to inorganic substance | IEP | HCCA |
BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
BP | GO:0010119 | regulation of stomatal movement | IEP | HCCA |
BP | GO:0010155 | regulation of proton transport | IEP | HCCA |
BP | GO:0010205 | photoinhibition | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010563 | negative regulation of phosphorus metabolic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010648 | negative regulation of cell communication | IEP | HCCA |
BP | GO:0015996 | chlorophyll catabolic process | IEP | HCCA |
BP | GO:0016311 | dephosphorylation | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016791 | phosphatase activity | IEP | HCCA |
BP | GO:0019374 | galactolipid metabolic process | IEP | HCCA |
BP | GO:0019375 | galactolipid biosynthetic process | IEP | HCCA |
BP | GO:0023057 | negative regulation of signaling | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0031400 | negative regulation of protein modification process | IEP | HCCA |
BP | GO:0033015 | tetrapyrrole catabolic process | IEP | HCCA |
BP | GO:0033673 | negative regulation of kinase activity | IEP | HCCA |
BP | GO:0033993 | response to lipid | IEP | HCCA |
BP | GO:0034765 | regulation of monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0042325 | regulation of phosphorylation | IEP | HCCA |
BP | GO:0042326 | negative regulation of phosphorylation | IEP | HCCA |
BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
BP | GO:0042631 | cellular response to water deprivation | IEP | HCCA |
BP | GO:0043086 | negative regulation of catalytic activity | IEP | HCCA |
BP | GO:0043155 | negative regulation of photosynthesis, light reaction | IEP | HCCA |
BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0043549 | regulation of kinase activity | IEP | HCCA |
BP | GO:0044092 | negative regulation of molecular function | IEP | HCCA |
BP | GO:0045859 | regulation of protein kinase activity | IEP | HCCA |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0045936 | negative regulation of phosphate metabolic process | IEP | HCCA |
BP | GO:0046149 | pigment catabolic process | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
CC | GO:0048471 | perinuclear region of cytoplasm | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051248 | negative regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051338 | regulation of transferase activity | IEP | HCCA |
BP | GO:0051348 | negative regulation of transferase activity | IEP | HCCA |
BP | GO:0071229 | cellular response to acid chemical | IEP | HCCA |
BP | GO:0071462 | cellular response to water stimulus | IEP | HCCA |
BP | GO:0097305 | response to alcohol | IEP | HCCA |
BP | GO:1900140 | regulation of seedling development | IEP | HCCA |
BP | GO:1901419 | regulation of response to alcohol | IEP | HCCA |
BP | GO:1901420 | negative regulation of response to alcohol | IEP | HCCA |
BP | GO:1901700 | response to oxygen-containing compound | IEP | HCCA |
BP | GO:1902456 | regulation of stomatal opening | IEP | HCCA |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:1903509 | liposaccharide metabolic process | IEP | HCCA |
BP | GO:1904062 | regulation of monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:1905156 | negative regulation of photosynthesis | IEP | HCCA |
BP | GO:1905957 | regulation of cellular response to alcohol | IEP | HCCA |
BP | GO:1905958 | negative regulation of cellular response to alcohol | IEP | HCCA |
No external refs found! |