AT1G21340


Description : Dof-type zinc finger DNA-binding family protein


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G21340
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00264070 CDF3,... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
AMTR_s00119p00099150 CDF2,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00160p00053540 DOF4.7,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Adi_g016055 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g071021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17401 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G014800.1 Ceric.11G014800 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G083700.1 OBP4, Ceric.14G083700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g12722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01002242001 ADOF2, DOF2 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01016538001 OBP3 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Gb_09675 CDF2 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Gb_12877 HCA2, DOF5.6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os01g48290.1 LOC_Os01g48290 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g15350.1 LOC_Os02g15350 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g16850.1 OBP3, LOC_Os03g16850 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g58190.1 LOC_Os04g58190 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os05g02150.1 OBP3, LOC_Os05g02150 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g32510.1 TMO6, LOC_Os07g32510 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os08g38220.1 LOC_Os08g38220 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Len_g13353 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30870 HCA2, DOF5.6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05845 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41543 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48794 CDF3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11469 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31297 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18370 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077950.3.1 Solyc02g077950 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc02g090310.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc03g121400.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc08g082910.2.1 Solyc08g082910 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Spa_g31006 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001988_P001 TMO6, Zm00001e001988 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e004809_P001 CDF3, Zm00001e004809 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e007228_P002 Zm00001e007228 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP HCCA
MF GO:0047617 acyl-CoA hydrolase activity IEP HCCA
MF GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 39 92
No external refs found!