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Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits to 145 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G19330 | |
| Cluster | HCCA: Cluster_136 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g06518 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g20897 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0084.g038914 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19751 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g50138 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G085500.1 | Ceric.18G085500 | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G016000.1 | Ceric.28G016000 | associated component *(AFR) of histone deacetylase... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G039900.1 | Ceric.29G039900 | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43177 | No alias | associated component *(AFR) of histone deacetylase... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g47805 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009650001 | No alias | Chromatin organisation.histone modifications.histone... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019028001 | No alias | Chromatin organisation.histone modifications.histone... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g14311 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g18360 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g20047 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g30194 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g079930.3.1 | Solyc04g079930 | associated component SAP30 of histone deacetylase machineries | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g37464 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001708 | cell fate specification | IEP | HCCA |
| BP | GO:0002237 | response to molecule of bacterial origin | IEP | HCCA |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | HCCA |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | HCCA |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | HCCA |
| BP | GO:0007020 | microtubule nucleation | IEP | HCCA |
| BP | GO:0007267 | cell-cell signaling | IEP | HCCA |
| BP | GO:0009556 | microsporogenesis | IEP | HCCA |
| BP | GO:0009607 | response to biotic stimulus | IEP | HCCA |
| BP | GO:0009616 | RNAi-mediated antiviral immune response | IEP | HCCA |
| BP | GO:0010050 | vegetative phase change | IEP | HCCA |
| BP | GO:0010103 | stomatal complex morphogenesis | IEP | HCCA |
| BP | GO:0010234 | anther wall tapetum cell fate specification | IEP | HCCA |
| BP | GO:0010267 | ta-siRNA processing | IEP | HCCA |
| MF | GO:0015923 | mannosidase activity | IEP | HCCA |
| CC | GO:0016324 | apical plasma membrane | IEP | HCCA |
| MF | GO:0019199 | transmembrane receptor protein kinase activity | IEP | HCCA |
| BP | GO:0023052 | signaling | IEP | HCCA |
| BP | GO:0034293 | sexual sporulation | IEP | HCCA |
| BP | GO:0035194 | RNA-mediated post-transcriptional gene silencing | IEP | HCCA |
| MF | GO:0038023 | signaling receptor activity | IEP | HCCA |
| BP | GO:0043207 | response to external biotic stimulus | IEP | HCCA |
| BP | GO:0043934 | sporulation | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| BP | GO:0048236 | plant-type sporogenesis | IEP | HCCA |
| BP | GO:0048437 | floral organ development | IEP | HCCA |
| BP | GO:0048443 | stamen development | IEP | HCCA |
| BP | GO:0048827 | phyllome development | IEP | HCCA |
| BP | GO:0051321 | meiotic cell cycle | IEP | HCCA |
| MF | GO:0060089 | molecular transducer activity | IEP | HCCA |
| BP | GO:0090626 | plant epidermis morphogenesis | IEP | HCCA |
| BP | GO:0090698 | post-embryonic plant morphogenesis | IEP | HCCA |
| CC | GO:0098590 | plasma membrane region | IEP | HCCA |
| BP | GO:0099402 | plant organ development | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025718 | SAP30_Sin3-bd | 172 | 225 |
| No external refs found! |