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AT1G18780


Description : RING/U-box superfamily protein


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G18780

Target Alias Description ECC score Gene Family Method Actions
AT1G18760 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 OrthoFinder output from all 47 species
AT1G60360 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G13228 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G53910 No alias RING/U-box superfamily protein 0.07 OrthoFinder output from all 47 species
Cba_g67617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G065800.1 Ceric.09G065800 not classified & original description: pacid=50588117... 0.02 OrthoFinder output from all 47 species
Len_g22017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50355 RHC1A RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Solyc02g088030.1.1 Solyc02g088030 E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 276 318
No external refs found!