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AT1G18470


Description : Transmembrane Fragile-X-F-associated protein


Gene families : OG0004649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004649_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G18470
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g49900.1 LOC_Os03g49900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g14303 No alias E3 ubiquitin ligase *(PPRT) & original description: none 0.03 OrthoFinder output from all 47 species
Smo229713 No alias No description available 0.03 OrthoFinder output from all 47 species
Zm00001e005410_P001 Zm00001e005410 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e012214_P002 Zm00001e012214 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005402 carbohydrate:monoatomic cation symporter activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR019396 TM_Fragile-X-F-assoc 28 292
No external refs found!