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  5. AT1G17700

AT1G17700 (PRA1.F1)


Aliases : PRA1.F1

Description : prenylated RAB acceptor 1.F1


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G17700
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00052p00041770 PRA7, PRA1.F2,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00184220 PRA1.B3,... PRA1 family protein B4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G55640 PRA1.G1 prenylated RAB acceptor 1.G1 0.05 OrthoFinder output from all 47 species
Ala_g26355 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G057500.1 PRA1.B4, Ceric.02G057500 B-G-class Rab-GDF protein & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g08868 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g10702 PRA7, PRA1.F2 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Gb_07381 PRA1.B2 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Lfl_g12734 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
MA_502220g0010 No alias PRA1 family protein D OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g08496 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24043 PRA1.B3 B-G-class Rab-GDF protein & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15968 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04246 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g61993 PRA1.F3, PRA8 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014691 PRA1.B2 B-G-class Rab-GDF protein & original description: CDS=1-618 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017592 PRA1.B3 B-G-class Rab-GDF protein & original description: CDS=1-558 0.03 OrthoFinder output from all 47 species
Sam_g11811 No alias B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10214 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10215 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02419 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15611 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031897_P001 PRA1.B2, Zm00001e031897 B-G-class Rab-GDF protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
BP GO:0016192 vesicle-mediated transport IDA Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0006949 syncytium formation IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
CC GO:0008180 COP9 signalosome IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 32 172
No external refs found!