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  5. AT1G17200

AT1G17200


Description : Uncharacterised protein family (UPF0497)


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G17200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00209400 evm_27.TU.AmTr_v1... CASP-like protein 2C1 OS=Sorghum bicolor 0.08 OrthoFinder output from all 47 species
AMTR_s00131p00032340 evm_27.TU.AmTr_v1... CASP-like protein 2A1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT5G54980 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
Adi_g005547 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g031098 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g01061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g030020 No alias not classified & original description: CDS=85-666 0.06 OrthoFinder output from all 47 species
Azfi_s0381.g067386 No alias not classified & original description: CDS=336-929 0.05 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.03 OrthoFinder output from all 47 species
Ceric.23G007600.1 Ceric.23G007600 not classified & original description: pacid=50611535... 0.03 OrthoFinder output from all 47 species
Ceric.23G007900.1 Ceric.23G007900 not classified & original description: pacid=50611019... 0.04 OrthoFinder output from all 47 species
Dac_g09088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45174 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g46991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04283 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01029179001 No alias CASP-like protein 2C1 OS=Vitis vinifera 0.08 OrthoFinder output from all 47 species
LOC_Os02g08110.1 LOC_Os02g08110 CASP-like protein 2C2 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os06g44610.1 LOC_Os06g44610 CASP-like protein 2C1 OS=Oryza sativa subsp. japonica... 0.1 OrthoFinder output from all 47 species
LOC_Os12g32970.1 LOC_Os12g32970 CASP-like protein 2B1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g04097 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431555g0010 No alias CASP-like protein 2A3 OS=Picea sitchensis... 0.05 OrthoFinder output from all 47 species
MA_8167318g0010 No alias CASP-like protein 2BC1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
Mp5g15430.1 No alias CASP-like protein 2U1 OS=Marchantia polymorpha... 0.03 OrthoFinder output from all 47 species
Ore_g04612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007556 No alias not classified & original description: CDS=113-772 0.04 OrthoFinder output from all 47 species
Sam_g02059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo418756 No alias CASP-like protein 2U8 OS=Selaginella moellendorffii 0.02 OrthoFinder output from all 47 species
Solyc05g054190.4.1 Solyc05g054190 CASP-like protein 2B1 OS=Vitis vinifera... 0.05 OrthoFinder output from all 47 species
Solyc07g006855.2.1 Solyc07g006855 CASP-like protein 2C1 OS=Populus trichocarpa... 0.04 OrthoFinder output from all 47 species
Solyc07g056040.3.1 Solyc07g056040 CASP-like protein 2A1 OS=Vitis vinifera... 0.05 OrthoFinder output from all 47 species
Spa_g00241 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g16154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000793_P001 Zm00001e000793 CASP-like protein 2U2 OS=Sorghum bicolor... 0.04 OrthoFinder output from all 47 species
Zm00001e013801_P001 Zm00001e013801 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040663_P001 Zm00001e040663 CASP-like protein 2A2 OS=Zea mays (sp|b6sr79|cspl7_maize : 271.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
BP GO:0006949 syncytium formation RCA Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 30 168
No external refs found!