AT1G16930

Description : F-box/RNI-like/FBD-like domains-containing protein

Gene families : OG0007014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007014_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G16930

Target	Alias	Description	ECC score	Gene Family Method
AT3G23955	No alias	F-box family protein	0.04	OrthoFinder output from all 47 species
AT4G13985	FBD1	FBD-associated F-box protein	0.03	OrthoFinder output from all 47 species
AT5G18780	No alias	F-box/RNI-like superfamily protein	0.05	OrthoFinder output from all 47 species
AT5G22660	No alias	FBD, F-box, Skp2-like and Leucine Rich Repeat domains...	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0042023	DNA endoreduplication	IEP	HCCA
BP	GO:0044786	cell cycle DNA replication	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001810	F-box_dom	16	53
IPR013101	Leu-rich_rpt_2	163	188
IPR013101	Leu-rich_rpt_2	56	73
IPR006566	FBD	366	423

External Links

No external refs found!