AT1G16890 (UBC13B, UBC36)


Aliases : UBC13B, UBC36

Description : ubiquitin-conjugating enzyme 36


Gene families : OG0002491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002491_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G16890

Target Alias Description ECC score Gene Family Method Actions
Adi_g049682 UBC13A, UBC35 E2 ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0033.g025072 UBC13A, UBC35 E2 ubiquitin-conjugating enzyme & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01014215001 UBC13A, UBC35 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
MA_138402g0020 UBC13B, UBC36 ubiquitin-conjugating E2 protein 0.03 OrthoFinder output from all 47 species
Msp_g19012 UBC13A, UBC35 E2 ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020191_P001 UBC13A, UBC35,... ubiquitin-conjugating E2 protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IDA Interproscan
BP GO:0010039 response to iron ion IMP Interproscan
BP GO:0010053 root epidermal cell differentiation IGI Interproscan
CC GO:0031372 UBC13-MMS2 complex IPI Interproscan
Type GO Term Name Evidence Source
BP GO:0000304 response to singlet oxygen IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005775 vacuolar lumen IEP HCCA
CC GO:0005776 autophagosome IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0008794 arsenate reductase (glutaredoxin) activity IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0019776 Atg8 ligase activity IEP HCCA
MF GO:0019779 Atg8 activating enzyme activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
MF GO:0030611 arsenate reductase activity IEP HCCA
MF GO:0030613 oxidoreductase activity, acting on phosphorus or arsenic in donors IEP HCCA
MF GO:0030614 oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034599 cellular response to oxidative stress IEP HCCA
BP GO:0034614 cellular response to reactive oxygen species IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071452 cellular response to singlet oxygen IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 2 112
No external refs found!