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AT1G16250


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G16250

Target Alias Description ECC score Gene Family Method Actions
Adi_g018621 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g03275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g00844 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dde_g04283 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Len_g21858 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
MA_135002g0010 SKIP4 F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pnu_g11708 SKIP4 substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008048 AFR substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e010956_P001 SKIP6, Zm00001e010956 F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 9 46
IPR006652 Kelch_1 99 152
IPR006652 Kelch_1 154 201
No external refs found!