AT1G15970

Description : DNA glycosylase superfamily protein

Gene families : OG0001057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001057_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G15970

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00209300	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AT5G57970	No alias	DNA glycosylase superfamily protein	0.04	OrthoFinder output from all 47 species
Adi_g050770	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g054795	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g27459	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g02533	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g09809	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.34G042800.1	Ceric.34G042800	not classified & original description: pacid=50623635...	0.03	OrthoFinder output from all 47 species
Ehy_g14462	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g25085	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_13653	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Pnu_g31518	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g15736	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc12g010050.2.1	Solyc12g010050	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e007660_P001	Zm00001e007660	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e030438_P002	Zm00001e030438	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e034160_P002	Zm00001e034160	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003905	alkylbase DNA N-glycosylase activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	ISS	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	None	Extended
MF	GO:0019104	DNA N-glycosylase activity	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043733	DNA-3-methylbase glycosylase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004619	phosphoglycerate mutase activity	IEP	HCCA
BP	GO:0006625	protein targeting to peroxisome	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
CC	GO:0009543	chloroplast thylakoid lumen	IEP	HCCA
BP	GO:0009555	pollen development	IEP	HCCA
BP	GO:0010118	stomatal movement	IEP	HCCA
BP	GO:0015919	peroxisomal membrane transport	IEP	HCCA
BP	GO:0016558	protein import into peroxisome matrix	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	HCCA
CC	GO:0031977	thylakoid lumen	IEP	HCCA
CC	GO:0031978	plastid thylakoid lumen	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0043574	peroxisomal transport	IEP	HCCA
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	HCCA
MF	GO:0046537	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA
BP	GO:0065002	intracellular protein transmembrane transport	IEP	HCCA
BP	GO:0071806	protein transmembrane transport	IEP	HCCA
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	HCCA
BP	GO:0072662	protein localization to peroxisome	IEP	HCCA
BP	GO:0072663	establishment of protein localization to peroxisome	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005019	Adenine_glyco	154	326

External Links

No external refs found!

AT1G15970

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation