AT1G15590


Description : BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G80400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0018281 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0018281_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G15590
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AT1G15640 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006863 purine nucleobase transport RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
BP GO:0006012 galactose metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
MF GO:0035250 UDP-galactosyltransferase activity IEP HCCA
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP HCCA
MF GO:0047216 inositol 3-alpha-galactosyltransferase activity IEP HCCA
MF GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity IEP HCCA
MF GO:0050502 cis-zeatin O-beta-D-glucosyltransferase activity IEP HCCA
MF GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!