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AT1G15250


Description : Zinc-binding ribosomal protein family protein


Gene families : OG0002755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G15250
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00029660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Aob_g02563 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g28619 No alias component *(eL37) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene09915.t1 Aspi01Gene09915 component *(eL37) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre10.g430400 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01017081001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01035677001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Gb_33514 No alias component RPL37 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp2g12400.1 No alias component RPL37 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Pp3c18_13160V3.1 Pp3c18_13160 Zinc-binding ribosomal protein family protein 0.01 OrthoFinder output from all 47 species
Pp3c21_9910V3.1 Pp3c21_9910 Zinc-binding ribosomal protein family protein 0.05 OrthoFinder output from all 47 species
Solyc08g068180.3.1 Solyc08g068180 component RPL37 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e013434_P001 Zm00001e013434 component RPL37 of LSU proteome component 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005840 ribosome ISS Interproscan
BP GO:0006412 translation ISS Interproscan
CC GO:0022625 cytosolic large ribosomal subunit IDA Interproscan
BP GO:0042254 ribosome biogenesis ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000036 acyl carrier activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0022626 cytosolic ribosome IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
MF GO:0044620 ACP phosphopantetheine attachment site binding IEP HCCA
MF GO:0051192 prosthetic group binding IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140414 phosphopantetheine-dependent carrier activity IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
InterPro domains Description Start Stop
IPR001569 Ribosomal_L37e 3 53
No external refs found!