AT1G14850 (NUP155)

Aliases : NUP155

Description : nucleoporin 155

Gene families : OG0004159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004159_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G14850
Cluster	HCCA: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
Adi_g057726	NUP155	scaffold nucleoporin of nuclear pore complex *(NUP155) &...	0.03	OrthoFinder output from all 47 species
Ala_g08015	NUP155	scaffold nucleoporin of nuclear pore complex *(NUP155) &...	0.04	OrthoFinder output from all 47 species
Als_g01209	NUP155	scaffold nucleoporin of nuclear pore complex *(NUP155) &...	0.03	OrthoFinder output from all 47 species
Aop_g13988	NUP155	scaffold nucleoporin of nuclear pore complex *(NUP155) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene68733.t1	NUP155, Aspi01Gene68733	scaffold nucleoporin of nuclear pore complex *(NUP155) &...	0.03	OrthoFinder output from all 47 species
Azfi_s0010.g012176	NUP155	scaffold nucleoporin of nuclear pore complex *(NUP155) &...	0.05	OrthoFinder output from all 47 species
Ceric.28G038900.1	NUP155, Ceric.28G038900	scaffold nucleoporin of nuclear pore complex *(NUP155) &...	0.04	OrthoFinder output from all 47 species
Cre09.g394350	NUP155	Protein translocation.nucleus.nucleocytoplasmic...	0.05	OrthoFinder output from all 47 species
Dac_g15658	NUP155	scaffold nucleoporin of nuclear pore complex *(NUP155) &...	0.02	OrthoFinder output from all 47 species
Dcu_g51868	NUP155	scaffold nucleoporin of nuclear pore complex *(NUP155) &...	0.03	OrthoFinder output from all 47 species
Dde_g13741	NUP155	scaffold nucleoporin of nuclear pore complex *(NUP155) &...	0.03	OrthoFinder output from all 47 species
GSVIVT01011661001	NUP155	Protein translocation.nucleus.nucleocytoplasmic...	0.12	OrthoFinder output from all 47 species
GSVIVT01011662001	NUP155	Protein translocation.nucleus.nucleocytoplasmic...	0.07	OrthoFinder output from all 47 species
Gb_24664	NUP155	NUP155 scaffold nucleoporin of nuclear pore complex	0.05	OrthoFinder output from all 47 species
LOC_Os06g20090.1	NUP155, LOC_Os06g20090	NUP155 scaffold nucleoporin of nuclear pore complex	0.1	OrthoFinder output from all 47 species
MA_10429005g0010	NUP155	NUP155 scaffold nucleoporin of nuclear pore complex	0.03	OrthoFinder output from all 47 species
Mp6g03580.1	NUP155	NUP155 scaffold nucleoporin of nuclear pore complex	0.08	OrthoFinder output from all 47 species
Ore_g37203	NUP155	scaffold nucleoporin of nuclear pore complex *(NUP155) &...	0.04	OrthoFinder output from all 47 species
Ppi_g04712	NUP155	scaffold nucleoporin of nuclear pore complex *(NUP155) &...	0.03	OrthoFinder output from all 47 species
Solyc07g008160.3.1	NUP155, Solyc07g008160	NUP155 scaffold nucleoporin of nuclear pore complex	0.09	OrthoFinder output from all 47 species
Zm00001e000883_P002	NUP155, Zm00001e000883	NUP155 scaffold nucleoporin of nuclear pore complex	0.08	OrthoFinder output from all 47 species
Zm00001e038690_P002	NUP155, Zm00001e038690	NUP155 scaffold nucleoporin of nuclear pore complex	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005643	nuclear pore	ISS	Interproscan
CC	GO:0005730	nucleolus	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0032259	methylation	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000059	obsolete protein import into nucleus, docking	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0003730	mRNA 3'-UTR binding	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
CC	GO:0005635	nuclear envelope	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0006405	RNA export from nucleus	IEP	HCCA
BP	GO:0006406	mRNA export from nucleus	IEP	HCCA
BP	GO:0006555	methionine metabolic process	IEP	HCCA
BP	GO:0006606	protein import into nucleus	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009086	methionine biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009846	pollen germination	IEP	HCCA
BP	GO:0009910	negative regulation of flower development	IEP	HCCA
BP	GO:0010074	maintenance of meristem identity	IEP	HCCA
MF	GO:0015288	porin activity	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
MF	GO:0017151	DEAD/H-box RNA helicase binding	IEP	HCCA
BP	GO:0019827	stem cell population maintenance	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0022829	wide pore channel activity	IEP	HCCA
CC	GO:0031965	nuclear membrane	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034504	protein localization to nucleus	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0048581	negative regulation of post-embryonic development	IEP	HCCA
BP	GO:0050657	nucleic acid transport	IEP	HCCA
BP	GO:0050658	RNA transport	IEP	HCCA
BP	GO:0051028	mRNA transport	IEP	HCCA
BP	GO:0051093	negative regulation of developmental process	IEP	HCCA
BP	GO:0051168	nuclear export	IEP	HCCA
BP	GO:0051170	import into nucleus	IEP	HCCA
BP	GO:0051236	establishment of RNA localization	IEP	HCCA
BP	GO:0051241	negative regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:0098727	maintenance of cell number	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:2000242	negative regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014908	Nucleoporin_Nup133/Nup155_N	54	544

External Links

No external refs found!

AT1G14850 (NUP155)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation